BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D04LP1|AL428891
(892 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1152 1700 0.0
>3x_Contig1152
Length = 5366
Score = 1700 bits (857), Expect = 0.0
Identities = 884/892 (99%), Gaps = 2/892 (0%)
Strand = Plus / Minus
Query: 1 atctcaaattgttagatcttaaaccactgctactaggagcggcgcrngctncntncttgc 60
||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 2282 atctcaaattgttagatcttaaaccactgctactaggagcggcgcgagccgtgt-cttgc 2224
Query: 61 gtggcatttgacgaagacgaaggatagtgaaacggagaagagcctacgcctcggtcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 gtggcatttgacgaagacgaaggatagtgaaacggagaagagcctacgcctcggtcttga 2164
Query: 121 gatgcctgggaatcctgtgtaccatgaggagctggagaagagctaggatcataaaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 gatgcctgggaatcctgtgtaccatgaggagctggagaagagctaggatcataaaacaaa 2104
Query: 181 tttggtgaacttggttgttgagctggaggtgaggacataatattgttaaccgtttgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 tttggtgaacttggttgttgagctggaggtgaggacataatattgttaaccgtttgtctt 2044
Query: 241 cctgtgttctatggatatatactgccactattatccaaatgctaattcagcaattttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 cctgtgttctatggatatatactgccactattatccaaatgctaattcagcaattttatc 1984
Query: 301 aaacctactaagcagctaaataatcctaggttccctgatatatcacctttcaattgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 aaacctactaagcagctaaataatcctaggttccctgatatatcacctttcaattgataa 1924
Query: 361 tgttatcttgtttgagatgctttgagtgaactaagtgaaactcgttaagattttacacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 tgttatcttgtttgagatgctttgagtgaactaagtgaaactcgttaagattttacacat 1864
Query: 421 ttttggttacatagttacatttcctaaagaagaaaacagaacaaattgaaataaacaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 ttttggttacatagttacatttcctaaagaagaaaacagaacaaattgaaataaacaagg 1804
Query: 481 ttctaatgagcccttgccaccgttgataataccatggatccactcagctcaatggtcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 ttctaatgagcccttgccaccgttgataataccatggatccactcagctcaatggtcagt 1744
Query: 541 atcttcgccgatcagaattggagttgcattatttgaagagggaacaatgatcacgtgatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 atcttcgccgatcagaattggagttgcattatttgaagagggaacaatgatcacgtgatg 1684
Query: 601 tacaattgttctgttttaaaagaaattaacctttaaaatgaaataaagtggtaacaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tacaattgttctgttttaaaagaaattaacctttaaaatgaaataaagtggtaacaagaa 1624
Query: 661 ctctgtcagaggcgagagataagcgaaccactttcgccagtgtgactcaattcttctgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 ctctgtcagaggcgagagataagcgaaccactttcgccagtgtgactcaattcttctgca 1564
Query: 721 caatatcattattcaacgtgaatttattgtactttcgtttagttgtgtttttgtcccgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 caatatcattattcaacgtgaatttattgtactttcgtttagttgtgtttttgtcccgtt 1504
Query: 781 tggaaactggtaagaagtgatgaatcccactgttagtgatgaacgagatcgggcagagag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 tggaaactggtaagaagtgatgaatcccactgttagtgatgaacgagatcgggcagagag 1444
Query: 841 aattagactcagcataatggggcctcaaacgaggtccagtcgaatgagctat 892
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1443 aattagactcagcataat-gggcctcaaacgaggtccagtcgaatgagctat 1393
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6953
Number of Sequences: 1807
Number of extensions: 6953
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)